Basic Techniques in Wood Chemistry

Objective: obtain a better feel for the "tools of the trade."

Important Methods
Separation Schemes
Chromatography (HPLC and GC)
Spectroscopy (UV, IR, MS, NMR)

Introduction
How do we know what we have when we look at a piece of wood, a wood extract, or a purified cellulose, hemicellulose or lignin? It's not that easy. However, there are several very useful tools that chemists rely upon when characterizing the chemical constitution of a material. Outlined below are the main tools of the trade.

Separation
The first thing you have to do is separate out the substance that you are interested in. A general scheme to separate out the components of wood using solvents, acids and bases is shown below:

In this scheme, lignin is obtained as a degradation product and is not intact. The polysaccharides are relatively unmodified although their DPs will be shorter and the hemicellulose acetate groups will be lost. If one wanted a relatively intact lignin, one typically prepares an extractive-free wood meal (grinding followed by solvent extraction) and then ball mill to mechanically degrade the wood structure to the point that some of the lignin can be solubilized in a solution of dioxane/water. Newer techniques for improved lignin yield utilize an enzymatic digestion of the polysaccharides prior to extraction with dioxane/water. This opens up the matrix to better extract out the soluble lignin. Both techniques will modify the lignin to some degree.

Analysis
Let's say we have separated out are components and wish to investigate structure. What tools are available to do this? The most useful techniques rely on chromatographic and spectroscopic techniques. Chromatography relies on the fact that compounds have different polarities and/or shapes. When they are placed in contact with a solid material, it will interact with this material at a level which depends upon the polarity and/or size of the solid surface. The pdf file below entitled Basics of HPLC provides an introduction to the technique and the file entitled Example Chromatograms describes its use in investigating lignin-tannin bonds in wood. Gas chromatography works essentially the same way although the carrier "solvent" is now a gas like nitrogen. For this technique to work, the sample has to be somewhat volatile.
 
Spectroscopy is also a useful technique. Ultraviolet spectroscopy (UV) relies on the ability of certain compounds to absorb UV light. This can be quantitated and the technique is often used to detect compounds eluting from an HPLC column. Infrared spectroscopy (IR) is a technique that provides an indication of functional groups. Bonds will stretch and vibrate at specific IR frequencies and this can be detected and quantitated in an IR instrument.
 
By far the most useful spectroscopic techniques are mass spectroscopy (MS) and nuclear magnetic resonance spectroscopy (NMR). Mass spectroscopy involves volatilizing a compound and essentially breaking it apart with a sledgehammer. The molecule will cleave in specific ways due to the functional groups it contains. These molecular pieces can be detected based solely on their molecular weight. When compared to a database you can piece the molecule back together and certain structures can often be generated or ruled out. NMR relies on the fact that nuclei in each atom will tend to align when placed in a magnetic field. If I perturb their alignment with radiofrequency, the nuclei absorb the energy and move to a higher energy level. An NMR spectrometer monitors how they relax back to the aligned state. The rate at which they do that depends upon the local environment within the molecule. Since most environments are different the relaxation is different. What results is a spectrum which is a fingerprint specific for each atom. Hydrogen and carbon NMR are the most useful techiques in wood chemistry, and with a database in hand one can often generate a structure from the NMR spectra recorded. This is a powerful but expensive technique with the most sophisticated commercially available spectrometers costing about $3 million. To see the power of NMR in determining some fundamental aspects of lignin biosynthesis, you can download the pdf files available from the Dairy Forage Research Center Web Site in Madison, WI.
 

Separation Scheme.
Basics of HPLC.
Example Chromatograms.
 

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